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020 ▼a 9781088355176
035 ▼a (MiAaPQ)AAI22587093
040 ▼a MiAaPQ ▼c MiAaPQ ▼d 247004
0820 ▼a 575
1001 ▼a Schmidt, Casey Alexandra.
24510 ▼a In vivo Analysis of Metazoan tRNA Intron Splicing.
260 ▼a [S.l.]: ▼b The University of North Carolina at Chapel Hill., ▼c 2019.
260 1 ▼a Ann Arbor: ▼b ProQuest Dissertations & Theses, ▼c 2019.
300 ▼a 134 p.
500 ▼a Source: Dissertations Abstracts International, Volume: 81-05, Section: B.
500 ▼a Advisor: Matera, A Gregory.
5021 ▼a Thesis (Ph.D.)--The University of North Carolina at Chapel Hill, 2019.
506 ▼a This item must not be sold to any third party vendors.
520 ▼a Pre-tRNA processing is an essential step in generating a supply of functional mature tRNAs. In some instances, this processing event includes removal of an intron. Recent work from our lab has shown that these introns are cut out of pre-tRNAs and ligated into circular RNAs, called tricRNAs, in the fruit fly Drosophila melanogaster. To study the mechanism of tricRNA biogenesis in Drosophila, I generated a series of splicing reporters adapted for expression in human and fly cells. Using these reporters, I discovered specific cis-acting elements important for proper spicing, including a conserved base pair found in all metazoan pre-tRNAs to date. I also identified candidate tRNA processing factors in Drosophila via sequence homology to human factors, and verified these candidates using an in vivo cellular splicing assay. My results show that Drosophila use the "direct ligation"-type tRNA ligation pathway also found in archaea and human cells. I also examined Drosophila tRNA processing factors in animals. Using available stocks, I observed striking neurological phenotypes when mutating or depleting these enzymes. These data correlate with a known human disease called Pontocerebellar hypoplasia (PCH), caused by mutations in human tRNA processing factors. I further found a tissue-specific requirement for the CLP1 ortholog cbc in both viability and locomotion, consistent with previous data from a mouse model. In addition to my cellular and animal work, I also developed a method to express circular RNAs using tRNA splicing. This method utilizes standard molecular biology techniques and can generate circular RNAs for a variety of functions. There are many potential applications to this technology. My work is the first characterization of tricRNA splicing in a metazoan model organism. My analysis of cis-acting elements and trans-acting factors yielded findings that are consistent with previously published data. Furthermore, the method I have developed has a wide range of potential uses, and my analysis of processing factor mutants provides new context to understanding a human neurological disease. Overall, my investigation of tricRNA biogenesis adds a new dimension to an established field.
590 ▼a School code: 0153.
650 4 ▼a Molecular biology.
650 4 ▼a Genetics.
690 ▼a 0307
690 ▼a 0369
71020 ▼a The University of North Carolina at Chapel Hill. ▼b Genetics and Molecular Biology.
7730 ▼t Dissertations Abstracts International ▼g 81-05B.
773 ▼t Dissertation Abstract International
790 ▼a 0153
791 ▼a Ph.D.
792 ▼a 2019
793 ▼a English
85640 ▼u http://www.riss.kr/pdu/ddodLink.do?id=T15492963 ▼n KERIS ▼z 이 자료의 원문은 한국교육학술정보원에서 제공합니다.
980 ▼a 202002 ▼f 2020
990 ▼a ***1008102
991 ▼a E-BOOK